Cambridge IGCSE0610

Chromosomes, genes and proteins

Biology 0610 Chapter Notes

What this chapter covers

Chromosomes, genes and proteinsMitosisMeiosisMonohybrid inheritance
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1. Chromosomes: The Blueprint of Life

Inside the nucleus of almost every one of your cells are tiny, thread-like structures called chromosomes. Think of them as tightly-packed instruction manuals. Each chromosome is made from a very long molecule of DNA (deoxyribonucleic acid), which is coiled up neatly. Humans have 46 chromosomes in most cells, arranged in 23 pairs. One chromosome from each pair comes from your mother, and the other from your father. These chromosomes carry all the genetic information that makes you unique, in the form of thousands of genes.

Key term

Chromosome: A thread-like structure of DNA, found in the nucleus of a cell, which carries genetic information in the form of genes.

Examiner insight

Examiners expect you to clearly state that chromosomes are located in the nucleus and are composed of DNA.

Worked example 13 marks

A student observes a cell from a human cheek under a microscope.(a) Name the part of the cell where chromosomes are located.(b) State the chemical that chromosomes are made of.(c) How many chromosomes would be present in this cell?

  1. 1

    Step 1 (a): Identify the location of genetic material in an animal cell. Chromosomes are located in the nucleus.

  2. 2

    Step 2 (b): Recall the composition of chromosomes. They are made of a molecule called DNA (deoxyribonucleic acid).

  3. 3

    Step 3 (c): State the number of chromosomes in a normal human body cell (somatic cell). A human cheek cell is a body cell and contains 46 chromosomes.

Recap

  • Chromosomes are found in the nucleus of eukaryotic cells.
  • They are made of a long molecule of DNA.
  • Humans have 23 pairs of chromosomes in their body cells, for a total of 46.
  • Chromosomes carry genetic information in sections called genes.

Quick check

  1. Where are chromosomes found in an animal cell?1 mark
  2. What large molecule are chromosomes primarily made of?1 mark

2. The Structure of DNA

DNA is a remarkable molecule with a structure called a double helix, which looks like a twisted ladder. The 'uprights' of the ladder are made of a repeating sugar and phosphate group. The 'rungs' of the ladder are made of pairs of chemicals called bases. There are four different bases in DNA: Adenine (A), Thymine (T), Cytosine (C), and Guanine (G). The way these bases pair up is very specific and is a crucial part of DNA's function: Adenine always pairs with Thymine (A-T), and Cytosine always pairs with Guanine (C-G). This is known as the complementary base pairing rule. A unit consisting of a sugar, a phosphate, and a base is called a nucleotide, which is the basic building block of DNA.

A pairs with T

C pairs with G

Key term

Double Helix: The molecular shape of a DNA molecule, resembling a twisted ladder, with two strands wound around each other.

Common pitfall

A common mistake is incorrectly pairing the bases, for example, pairing Adenine with Guanine. Remember the rule: 'A' with 'T', 'C' with 'G'.

Fun fact

If you could unwind all the DNA in all the cells of your body, it would stretch to the Sun and back more than 300 times.

Worked example 12 marks

A short section of one strand of a DNA molecule has the base sequence: A T T C G C A G. What is the base sequence of the complementary strand?

  1. 1

    Step 1: Write down the original sequence: A T T C G C A G.

  2. 2

    Step 2: Apply the complementary base pairing rule. Remember A pairs with T, and C pairs with G.

  3. 3

    Step 3: For each base in the original strand, write down its partner. A becomes T. T becomes A. T becomes A. C becomes G. G becomes C. C becomes G. A becomes T. G becomes C.

  4. 4

    Step 4: Combine the new bases to form the complementary sequence: T A A G C G T C.

Recap

  • DNA has a double helix structure.
  • The building blocks of DNA are nucleotides (sugar, phosphate, base).
  • There are four bases: Adenine (A), Thymine (T), Cytosine (C), and Guanine (G).
  • Adenine always pairs with Thymine (A-T).
  • Cytosine always pairs with Guanine (C-G).

Quick check

  1. Name the four bases found in DNA.1 mark
  2. Which base pairs with Guanine?1 mark

3. Genes and Proteins

A gene is a specific section of the DNA molecule. The sequence of bases (A, T, C, G) along a gene acts as a code. This genetic code holds the instructions for making a specific protein. Proteins are made from long chains of smaller molecules called amino acids. The sequence of bases in the gene determines the sequence of amino acids that are joined together. This amino acid sequence is critical because it causes the protein chain to fold into a unique 3D shape. The shape of a protein determines its function. For example, an enzyme's shape creates an active site, and an antibody's shape allows it to bind to a specific pathogen. Ultimately, these proteins determine an organism's characteristics, like eye colour or blood type.

Key term

Gene: A length of DNA that codes for a specific protein, which in turn contributes to a characteristic.

Examiner insight

Marks are consistently awarded for making the full link: DNA base sequence -> amino acid sequence -> protein shape and function -> characteristic.

Worked example 14 marks

Explain the relationship between a gene, a protein, and a characteristic such as hair texture.

  1. 1

    Step 1: Define a gene. A gene is a section of DNA with a specific sequence of bases.

  2. 2

    Step 2: Link the gene to a protein. The base sequence of the gene for hair texture provides the code for making a specific protein, for example, keratin.

  3. 3

    Step 3: Explain how the protein is formed. The code dictates the sequence of amino acids to be joined together, which determines the protein's final 3D shape.

  4. 4

    Step 4: Link the protein to the characteristic. The shape and properties of the keratin protein produced determine the hair's texture (e.g., straight or curly). Therefore, the gene controls the characteristic via the protein it codes for.

Recap

  • A gene is a section of DNA that codes for a protein.
  • The sequence of bases in a gene determines the sequence of amino acids in a protein.
  • The amino acid sequence determines the protein's 3D shape and function.
  • Proteins control cell activities and determine the characteristics of an organism.

Quick check

  1. What are the smaller units that make up proteins?1 mark
  2. What determines the function of a protein?1 mark

4. How Proteins Are Made

The process of using a gene's instructions to build a protein is called protein synthesis. It happens in two main stages. Because the master copy of DNA cannot leave the nucleus, a temporary copy of the gene is made.

  1. Transcription: This happens in the nucleus. The DNA double helix unwinds at the site of the gene. A 'messenger' molecule called mRNA (messenger RNA) is created, which is a copy of the gene's base sequence. This mRNA molecule is small enough to leave the nucleus.
  2. Translation: The mRNA molecule travels out of the nucleus and into the cytoplasm, where it attaches to a tiny cellular machine called a ribosome. The ribosome 'reads' the mRNA code three bases at a time (a 'codon'). For each codon, a specific amino acid is brought to the ribosome. The ribosome joins these amino acids together in the correct order, forming a long chain that folds into a protein.

Key term

Protein Synthesis: The process where information from a gene is used to create a protein, involving transcription in the nucleus and translation at a ribosome.

Common pitfall

A very common error is stating that DNA leaves the nucleus. Remember, DNA is too important and stays protected; it's the disposable mRNA copy that travels to the ribosome.

Worked example 14 marks

Describe the roles of mRNA and ribosomes in protein synthesis.

  1. 1

    Step 1: Describe the role of mRNA. mRNA is a messenger molecule. It is a copy of the gene's code made in the nucleus during transcription.

  2. 2

    Step 2: Explain mRNA's movement. It moves out of the nucleus and into the cytoplasm, carrying the genetic code to the ribosome.

  3. 3

    Step 3: Describe the role of the ribosome. The ribosome is the site of translation. It attaches to the mRNA molecule.

  4. 4

    Step 4: Explain the ribosome's function. It reads the base sequence on the mRNA and assembles amino acids in the correct order to synthesise a specific protein.

Recap

  • Protein synthesis has two stages: transcription and translation.
  • Transcription occurs in the nucleus, where an mRNA copy of a gene is made.
  • The mRNA molecule leaves the nucleus and goes to the cytoplasm.
  • Translation occurs at a ribosome, which reads the mRNA to build a protein from amino acids.
  • The original DNA remains safely inside the nucleus.

Quick check

  1. Where in the cell does transcription take place?1 mark
  2. What is the name of the structure in the cytoplasm where proteins are assembled?1 mark

5. Inheritance: Genes and Alleles

You inherit your genes on the chromosomes you receive from your parents. For each characteristic, like eye colour, you have a gene. However, there can be different versions of that gene in the population. These different versions are called alleles. For example, for the eye colour gene, there might be a 'brown eye' allele and a 'blue eye' allele. Since you have two of each chromosome (one from each parent), you have two alleles for each gene. If both alleles are the same (e.g., two 'blue eye' alleles), you are homozygous for that trait. If the two alleles are different (e.g., one 'blue eye' allele and one 'brown eye' allele), you are heterozygous for that trait.

Key term

Allele: One of two or more alternative forms of a gene that arise by mutation and are found at the same place on a chromosome.

Common pitfall

Confusing the terms 'gene' and 'allele'. A gene is the instruction for a trait (e.g., the 'hair colour gene'), while alleles are the different options for that trait (e.g., 'black hair allele', 'blonde hair allele').

Worked example 13 marks

The gene for tongue rolling in humans has two alleles: 'R' (can roll tongue) and 'r' (cannot roll tongue). An individual has the allele combination 'Rr'.(a) Is this individual homozygous or heterozygous?(b) What is the difference between a gene and an allele?

  1. 1

    Step 1 (a): Analyse the allele combination 'Rr'. The individual has two different alleles for the same gene ('R' and 'r').

  2. 2

    Step 2 (a): Apply the definition. Having two different alleles for a trait means the individual is heterozygous.

  3. 3

    Step 3 (b): Define 'gene'. A gene is a section of DNA that codes for a characteristic (e.g., the ability to roll one's tongue).

  4. 4

    Step 4 (b): Define 'allele' and contrast it. An allele is a specific version of that gene (e.g., the 'can roll' version or the 'cannot roll' version).

Recap

  • Alleles are different versions of the same gene.
  • For each gene, an individual inherits one allele from each parent.
  • An individual with two identical alleles (e.g., AA or aa) is homozygous.
  • An individual with two different alleles (e.g., Aa) is heterozygous.
  • The combination of alleles an individual has is their genotype.

Quick check

  1. What is the term for an alternative form of a gene?1 mark
  2. If an organism's alleles for a trait are 'tt', is it homozygous or heterozygous?1 mark

6. Gene Mutations

A gene mutation is a random and permanent change in the sequence of bases in a DNA molecule. This can happen spontaneously when DNA is being copied during cell division, or it can be caused by exposure to certain chemicals or radiation. Since the base sequence of a gene codes for the amino acid sequence of a protein, a change in the bases can lead to a change in the amino acids. This may alter the final 3D shape of the protein, which can stop it from functioning correctly, or at all. A classic example is sickle-cell anaemia. A single base change in the gene for haemoglobin results in one different amino acid in the protein chain. This causes the haemoglobin molecules to stick together and the red blood cells to become a stiff, sickle shape. These cells can block blood vessels and carry less oxygen.

Key term

Mutation: A random change in the base sequence of DNA or in the structure or number of chromosomes.

Examiner insight

To gain full marks when explaining the effect of a mutation, students must link the change in DNA base sequence to a change in amino acid sequence, and then to a change in the protein's shape and function.

Worked example 14 marks

Explain how a gene mutation can result in a protein that does not function correctly. Use the example of an enzyme.

  1. 1

    Step 1: Define gene mutation. A gene mutation is a change in the DNA base sequence of a gene.

  2. 2

    Step 2: Link mutation to protein structure. This change in the DNA code can lead to a different sequence of amino acids being assembled during protein synthesis.

  3. 3

    Step 3: Link protein structure to shape. The altered amino acid sequence can cause the protein (enzyme) to fold into a different 3D shape.

  4. 4

    Step 4: Link shape to function. For an enzyme, this change in shape may alter the active site. If the substrate can no longer bind to the active site, the enzyme will not be able to catalyse its reaction and will be non-functional.

Recap

  • A gene mutation is a change in the DNA base sequence.
  • Mutations can happen randomly or be caused by mutagens.
  • A change in the gene's code can change the amino acid sequence of a protein.
  • An altered amino acid sequence can change the protein's shape and function.
  • Sickle-cell anaemia is an example of a disorder caused by a single gene mutation.

Quick check

  1. What is a gene mutation?1 mark
  2. Give one example of a human disorder caused by a gene mutation.1 mark

End-of-chapter exercise

Test yourself on the whole chapter. Work through these before moving on.

  1. Define the terms 'chromosome' and 'gene'.2 marks
  2. Describe the structure of a DNA molecule. You may use a labelled diagram in your answer.4 marks
  3. A short section of a DNA strand has the base sequence: G C A T T G C A. State the base sequence of the complementary strand.2 marks
  4. Explain, in detail, how a gene provides the instructions to make a specific protein.4 marks
  5. Distinguish between the terms 'homozygous' and 'heterozygous', using an example for each.3 marks
  6. Describe the main stages of protein synthesis that allow a gene in the nucleus to be expressed as a protein in the cytoplasm.5 marks
  7. Sickle-cell anaemia is a genetic disorder. Explain how a mutation in a gene can lead to this condition.4 marks
  8. Explain why a liver cell and a skin cell from the same person contain the same genes, but have very different structures and functions.3 marks
  9. A protein is made of a chain of 200 amino acids. The genetic code is a triplet code, meaning 3 bases code for one amino acid. What is the minimum number of DNA bases in the gene that codes for this protein?2 marks
  10. A cat's body cells each contain 38 chromosomes. How many chromosomes would be found in: (a) a muscle cell from the cat's leg? (b) a male cat's sperm cell?2 marks

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