Cambridge IGCSE0970

Enzymes

Biology 0970 Chapter Notes

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Enzymes
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1. Introduction to Enzymes

Enzymes are proteins that act as biological catalysts. A catalyst is a substance that speeds up a chemical reaction without being used up in the process. Within every living cell, thousands of chemical reactions, collectively known as metabolism, are taking place. These reactions are either anabolic (building up large molecules, e.g., protein synthesis) or catabolic (breaking down large molecules, e.g., digestion). Enzymes control the rate of these reactions, ensuring they happen fast enough to sustain life. Most enzymes work inside the cells where they are made (intracellular enzymes, like catalase which breaks down harmful hydrogen peroxide), while others are secreted to work outside the cell (extracellular enzymes, like the digestive enzyme amylase).

Key term

Biological Catalyst: A protein that speeds up the rate of a specific biochemical reaction without being changed by the reaction.

Examiner insight

Examiners award marks for defining enzymes as 'biological catalysts' and specifying that they are proteins. Simply stating they 'help reactions' is too vague.

Worked example 13 marks

Describe the role of enzymes in the metabolism of a living organism. [3]

  1. 1
    1. Enzymes are biological catalysts, meaning they speed up biochemical reactions. [1 mark]
  2. 2
    1. Metabolism is the sum of all chemical reactions in an organism, including anabolic (building up) and catabolic (breaking down) reactions. [1 mark]
  3. 3
    1. Enzymes control the rate of these metabolic reactions, allowing them to occur at a speed that can sustain life under normal body conditions. [1 mark]

Recap

  • Enzymes are proteins with a specific three-dimensional shape.
  • They function as biological catalysts to speed up metabolic reactions.
  • Enzymes are not consumed or changed during the reactions they catalyse.
  • Metabolism refers to all the chemical reactions occurring within a living organism.
  • Intracellular enzymes work inside cells, while extracellular enzymes work outside cells.

Quick check

  1. What type of biological molecule is an enzyme?1 mark
  2. State one example of an extracellular enzyme.1 mark

2. The Lock and Key Hypothesis

The way an enzyme works is explained by the 'lock and key' model. Each enzyme has a specific three-dimensional shape which includes a small depression or pocket called the active site. The molecule that the enzyme acts upon is called the substrate. The shape of the substrate is complementary to the shape of the active site, much like a specific key fits into a specific lock. The substrate binds to the active site to form an enzyme-substrate complex. Inside the complex, the reaction is catalysed, converting the substrate into products. The products then leave the active site, leaving the enzyme unchanged and free to catalyse another reaction. This specificity explains why an enzyme that digests starch (amylase) cannot digest protein.

Enzyme + Substrate → Enzyme-Substrate Complex → Enzyme + Product

Key term

Active Site: A specific region on the surface of an enzyme where the substrate binds and the chemical reaction is catalysed.

Common pitfall

Students often forget to state that the enzyme is unchanged at the end of the reaction and is free to bind with another substrate molecule.

Fun fact

A single molecule of the enzyme catalase can break down millions of hydrogen peroxide molecules per second, showcasing incredible efficiency.

Worked example 15 marks

The diagram shows an enzyme catalysing a reaction.i) Name the parts labelled A, B, and C. [3] ii) Explain why this model is known as the 'lock and key' hypothesis. [2]

  1. 1

    i) A is the Substrate. B is the Enzyme (or Active Site). C is the Product(s). [3 marks]

  2. 2

    ii) The model is called 'lock and key' because the substrate (the key) has a specific shape that is complementary to the shape of the enzyme's active site (the lock). [1 mark]

  3. 3

    Only the correctly shaped substrate can fit into the active site, which explains the specificity of enzyme action. [1 mark]

Recap

  • The lock and key model explains enzyme specificity.
  • The substrate's shape is complementary to the enzyme's active site.
  • The substrate binds to the active site to form an enzyme-substrate complex.
  • The reaction occurs at the active site, forming products.
  • The enzyme is unchanged after the reaction and can be reused.

Quick check

  1. What is the name of the molecule that an enzyme acts upon?1 mark
  2. What is formed when a substrate binds to an enzyme's active site?1 mark

3. Effect of Temperature on Enzymes

Temperature significantly affects the rate of enzyme-catalysed reactions. As temperature increases from a low value, both enzyme and substrate molecules gain kinetic energy. This leads to more frequent collisions between them, and these collisions have more energy, increasing the rate of reaction. This continues until the enzyme reaches its optimum temperature, which is the temperature at which it has maximum activity. For most human enzymes, this is around 37°C. If the temperature increases beyond the optimum, the enzyme starts to denature. The high temperature causes the bonds holding the protein's specific 3D shape to vibrate and break. This changes the shape of the active site, so the substrate can no longer bind. The enzyme is denatured and the reaction rate falls rapidly. This change is irreversible.

Key term

Denaturation: The irreversible change in the specific three-dimensional shape of a protein, such as an enzyme, caused by factors like extreme heat or pH.

Examiner insight

Be precise: state that high temperatures 'denature' the enzyme by changing the 'shape of the active site'. Simply saying the enzyme is 'killed' or 'dies' will not earn marks.

Fun fact

Some bacteria, called thermophiles, live in hot springs and have enzymes with optimum temperatures as high as 80°C or more.

Worked example 14 marks

The graph shows how temperature affects the rate of a reaction catalysed by a human enzyme. Describe and explain the shape of the graph. [4]

  1. 1
    1. (Description) As temperature increases from 0°C to around 37°C, the rate of reaction increases to a maximum. Beyond 37°C, the rate rapidly decreases. [1 mark]
  2. 2
    1. (Explanation for increase) As temperature rises, enzyme and substrate molecules gain kinetic energy, move faster, and collide more frequently, increasing the rate of reaction. [1 mark]
  3. 3
    1. (Explanation for peak) The peak at 37°C represents the optimum temperature, where the enzyme has its highest activity. [1 mark]
  4. 4
    1. (Explanation for decrease) Above the optimum temperature, the enzyme denatures. The high heat changes the shape of the active site, so the substrate can no longer fit, and the reaction stops. [1 mark]

Recap

  • Low temperatures result in low enzyme activity due to low kinetic energy.
  • Increasing temperature towards the optimum increases the rate of reaction.
  • The optimum temperature is where the enzyme's activity is at its peak.
  • Temperatures above the optimum cause the enzyme to denature.
  • Denaturation is an irreversible change in the shape of the active site.

Quick check

  1. What is the term for the temperature at which an enzyme works fastest?1 mark
  2. Explain why boiling an enzyme will permanently stop it from working.2 marks

4. Effect of pH on Enzymes

Just like temperature, pH also has a profound effect on enzyme activity. Each enzyme has an optimum pH at which it functions most effectively. For example, pepsin, an enzyme in the acidic environment of the stomach, has an optimum pH of around 2, while trypsin, in the alkaline small intestine, works best at a pH of about 8. If the pH moves away from the optimum (either more acidic or more alkaline), the rate of reaction decreases. This is because pH affects the ionic and hydrogen bonds that maintain the enzyme's specific 3D shape. A change in pH alters the shape of the active site, making it less complementary to the substrate, thus slowing the reaction. Extreme changes in pH can cause the enzyme to denature permanently, just as high temperatures do.

Key term

Optimum pH: The specific pH value at which an enzyme exhibits its maximum catalytic activity.

Common pitfall

A common mistake is assuming all enzymes have an optimum pH of 7. Students must remember that the optimum pH is specific to the enzyme and its location.

Worked example 17 marks

The table shows the activity of an enzyme at different pH values.i) Plot a graph of these results. [4] ii) Describe and explain the trend shown in your graph. [3]

  1. 1

    i) Correctly label axes (pH on x-axis, Relative activity on y-axis) [1 mark]. Use a suitable scale [1 mark]. Plot points accurately [1 mark]. Draw a smooth curve connecting the points [1 mark].

  2. 2

    ii) (Description) The enzyme's activity is low at pH 3, increases to a peak at pH 7, and then decreases again at higher pH values. [1 mark]

  3. 3

    iii) (Explanation) The peak at pH 7 is the enzyme's optimum pH. At pH values above or below this, the shape of the active site is altered, reducing its efficiency. [1 mark]

  4. 4

    iv) (Explanation) At extreme pH values (like 3 or 11), the enzyme is denatured, meaning the active site has permanently changed shape and can no longer bind to the substrate. [1 mark]

Recap

  • Every enzyme has an optimum pH where its activity is highest.
  • Different enzymes have different optimum pH values depending on their environment.
  • Deviations from the optimum pH cause the active site to change shape, reducing activity.
  • Extreme pH values cause irreversible denaturation of the enzyme.
  • Pepsin (stomach) has an optimum pH of ~2, while amylase (mouth) has an optimum pH of ~7.

Quick check

  1. The enzyme trypsin is found in the small intestine. Suggest its likely optimum pH range.1 mark
  2. What is the effect of a pH far from the optimum on an enzyme's active site?1 mark

5. Industrial Applications of Enzymes

Enzymes are widely used in industry because they are highly specific and can work under mild conditions (lower temperatures and pressures), which saves energy and reduces costs. Most industrial enzymes are sourced from microorganisms like bacteria and fungi, which can be grown in large quantities. Key examples include:

  1. Biological Washing Powders: Contain proteases to break down protein-based stains (e.g., blood, grass) and lipases to break down fat/oil-based stains.
  2. Food Processing: Pectinase is used to break down pectin in fruit cell walls, which clarifies fruit juice and increases the yield. Lactase is used to break down lactose in milk to produce lactose-free milk for intolerant individuals.
  3. Baby Food Production: Proteases are used to pre-digest the protein in baby foods, making them easier for infants to digest.

Protein --(Protease)--> Amino Acids (stain removal)

Pectin --(Pectinase)--> Simpler Sugars (juice clarification)

Lactose --(Lactase)--> Glucose + Galactose (lactose-free milk)

Key term

Biotechnology: The use of living organisms or their products, such as enzymes, for industrial or medical purposes.

Examiner insight

When asked for uses of enzymes, be specific. 'Using protease to remove protein-based stains like blood' is a stronger answer than just 'used in washing powders'.

Worked example 14 marks

Match each enzyme to a process useful to humans. [4] Enzymes:a) proteaseb) pectinasec) lactased) lipase Processes: 1) removal of fatty stains from clothing 2) preparation of lactose-free milk 3) clearing of fruit juice 4) removing blood stains

  1. 1

    a) protease matches with 4) removing blood stains (blood is protein-based). [1 mark]

  2. 2

    b) pectinase matches with 3) clearing of fruit juice (pectin makes juice cloudy). [1 mark]

  3. 3

    c) lactase matches with 2) preparation of lactose-free milk (lactose is milk sugar). [1 mark]

  4. 4

    d) lipase matches with 1) removal of fatty stains from clothing (lipids are fats). [1 mark]

Recap

  • Enzymes are used in industry to lower costs by working at mild temperatures and pressures.
  • Most industrial enzymes are obtained from microorganisms.
  • Proteases and lipases are used in biological washing powders.
  • Pectinase is used to clarify fruit juices.
  • Lactase is used to produce lactose-free milk.

Quick check

  1. Name the enzyme used to make fruit juice clear and state what it breaks down.2 marks
  2. State one advantage of using enzymes in industrial processes.1 mark

6. Immobilised Enzymes

In many industrial processes, it is beneficial to use immobilised enzymes. Immobilisation is a technique where enzyme molecules are attached to or trapped within an inert, insoluble support material, such as small beads of alginate gel or synthetic fibres. This has several major advantages over using free enzymes in a solution. Firstly, the product is not contaminated with the enzyme, which simplifies the purification process and reduces costs. Secondly, the immobilised enzymes can be easily recovered from the mixture and reused, making the process more economical. Thirdly, the process can be run continuously by passing the substrate over the immobilised enzymes in a column, which is more efficient than batch production. Finally, immobilisation often increases the stability of the enzyme, allowing it to withstand higher temperatures or non-optimal pH conditions.

Key term

Immobilisation: The process of attaching enzymes to an inert, insoluble material to increase their stability and allow for easy reuse.

Examiner insight

Examiners frequently ask for the advantages of using immobilised enzymes. Memorise at least two distinct benefits, such as 'the product is not contaminated with the enzyme' and 'the enzyme can be reused'.

Worked example 13 marks

State three advantages of using immobilised enzymes in industry. [3]

  1. 1
    1. The enzyme can be easily reused, which reduces the overall cost of the process. [1 mark]
  2. 2
    1. The product is not contaminated with the enzyme, so purification is simpler and cheaper. [1 mark]
  3. 3
    1. It allows for a continuous production process, which is more efficient than stopping and starting batches. (Alternative: Immobilisation can increase the stability of the enzyme). [1 mark]

Worked example 22 marks

Lactose-free milk is produced by passing milk through a column containing immobilised lactase. Explain why this is more efficient than mixing free lactase enzyme into a batch of milk. [2]

  1. 1
    1. Using immobilised lactase allows for a continuous flow process, so milk can be produced constantly without stopping to separate the enzyme. [1 mark]
  2. 2
    1. The lactase enzyme does not end up in the final milk product, and the same column of enzymes can be used repeatedly for new batches of milk, saving money. [1 mark]

Recap

  • Immobilised enzymes are fixed to an insoluble support material.
  • This prevents the enzyme from contaminating the product.
  • Immobilised enzymes can be easily recovered and reused.
  • The technique allows for efficient, continuous flow processes.
  • Immobilisation can increase the enzyme's stability to heat and pH changes.

Quick check

  1. State one economic advantage of using immobilised enzymes.1 mark
  2. Why is the product of a reaction using immobilised enzymes easier to purify?1 mark

End-of-chapter exercise

Test yourself on the whole chapter. Work through these before moving on.

  1. Define the term 'enzyme' and state which class of biological molecule enzymes belong to.2 marks
  2. Using the lock and key hypothesis, explain why the enzyme amylase can digest starch but cannot digest protein.3 marks
  3. Describe the effect of increasing the temperature from 10°C to 80°C on the rate of reaction of a typical human enzyme.4 marks
  4. The enzyme pepsin, found in the stomach, has an optimum pH of 2.0. Sketch a graph to show how the activity of pepsin changes between pH 1 and pH 7. Label your axes and mark the optimum pH on your graph.4 marks
  5. Biological washing powders containing enzymes like protease are often advertised as being effective at lower wash temperatures (e.g., 30-40°C). Explain the biological reason for this.3 marks
  6. Explain three advantages of using immobilised enzymes in industrial processes compared to using free enzymes in solution.3 marks
  7. An experiment measures the rate of an enzyme-catalysed reaction as the substrate concentration is increased, while temperature and pH are kept constant at their optimum levels. Describe and explain the expected results. You may use a sketch graph to aid your explanation.5 marks
  8. Pectinase is an enzyme used to extract more juice from apples. a) Explain why adding pectinase to crushed apples increases the juice yield. [2] b) Explain why the process is usually carried out at 40°C rather than 80°C. [3]5 marks
  9. Name two different industrial products made using enzymes. For each product, name the specific enzyme used.4 marks
  10. Describe an experiment to investigate the effect of pH on the activity of amylase breaking down starch. Your method should include how you would measure the rate of reaction.6 marks

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